6Y0U
Fucosylated Bicyclic peptide bp71 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.5 Angstrom resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-22 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 122.821, 56.600, 70.452 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.293 - 1.489 |
R-factor | 0.1694 |
Rwork | 0.168 |
R-free | 0.19190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oxc |
RMSD bond length | 0.006 |
RMSD bond angle | 0.822 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.0) |
Refinement software | PHENIX (v1.11.1-2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.293 | 1.496 |
High resolution limit [Å] | 1.489 | 1.489 |
Rmeas | 0.075 | 0.844 |
Number of reflections | 144479 | 22185 |
<I/σ(I)> | 6.16 | 1.31 |
Completeness [%] | 92.9 | 88.3 |
Redundancy | 1.74 | 1.59 |
CC(1/2) | 0.997 | 0.578 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 1.5 M Ammonium sulfate, 0.1 M Tris pH 8.5, 12% v/v Glycerol |