6Y0L
Crystal structure of human CD23 lectin domain N225D, K229E, S252N, T251N, R253G, S254G mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97945 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 113.704, 113.704, 45.700 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 56.852 - 1.650 |
R-factor | 0.1686 |
Rwork | 0.167 |
R-free | 0.20510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g9a |
RMSD bond length | 0.012 |
RMSD bond angle | 1.246 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 98.480 | 1.730 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.094 | |
Rpim | 0.028 | 0.413 |
Number of reflections | 20443 | |
<I/σ(I)> | 16.6 | 1.6 |
Completeness [%] | 94.4 | 99.8 |
Redundancy | 11.5 | 5.6 |
CC(1/2) | 0.999 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 2.0M ammonium sulphate, 0.2M sodium chloride, 0.1M sodium-cacodylate, 8mM CaCl2 |