6XSZ
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-002 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-08-22 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54187 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 109.694, 99.991, 118.587 |
Unit cell angles | 90.00, 95.95, 90.00 |
Refinement procedure
Resolution | 38.980 - 2.250 |
R-factor | 0.2031 |
Rwork | 0.201 |
R-free | 0.24410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5kdn |
RMSD bond length | 0.003 |
RMSD bond angle | 0.994 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.097 | 0.594 |
Rpim | 0.036 | 0.342 |
Number of reflections | 121176 | 6024 |
<I/σ(I)> | 17.9 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7 | 3.9 |
CC(1/2) | 0.994 | 0.796 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 291 | 7.6% Tascimate, 19% PEG 3350 |