6XRM
Crystal structure of human PI3K-gamma in complex with Compound 4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.999 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 144.711, 68.649, 106.718 |
Unit cell angles | 90.00, 95.38, 90.00 |
Refinement procedure
Resolution | 106.250 - 2.880 |
R-factor | 0.2427 |
Rwork | 0.241 |
R-free | 0.30490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | NONE |
RMSD bond length | 0.011 |
RMSD bond angle | 1.270 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 106.250 | 106.250 | 3.130 |
High resolution limit [Å] | 2.880 | 18.380 | 2.880 |
Rmerge | 0.042 | 0.012 | 0.438 |
Rmeas | 0.051 | 0.015 | 0.533 |
Total number of observations | 67612 | ||
Number of reflections | 23191 | 91 | 5138 |
<I/σ(I)> | 20.8 | 69.23 | 2.99 |
Completeness [%] | 97.2 | 86.7 | 98.3 |
Redundancy | 2.915 | 2.791 | 2.939 |
CC(1/2) | 0.999 | 1.000 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | PEG 4000, (NH4)2SO4, Na Form, Tris |