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6XRJ

Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]193.15
Detector technologyPIXEL
Collection date2018-03-03
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 43 2 2
Unit cell lengths201.587, 201.587, 154.327
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.710 - 3.150
R-factor0.2464
Rwork0.245
R-free0.28220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ukn
RMSD bond length0.012
RMSD bond angle2.034
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.7103.260
High resolution limit [Å]3.1473.147
Rmerge0.166
Number of reflections554125393
<I/σ(I)>13.41.3
Completeness [%]99.798.94
Redundancy99.6
CC(1/2)0.9920.525
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP3.5295.150.1M Citric acid pH3.5, 14% PEG 1000

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