Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6XMV

The crystal structure of Neisseria gonorrhoeae DolP (NGO1985)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-11-18
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.00
Spacegroup nameP 21 21 2
Unit cell lengths65.040, 125.900, 47.920
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.785 - 2.750
R-factor0.2282
Rwork0.226
R-free0.28230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2huk
RMSD bond length0.004
RMSD bond angle0.567
Data reduction softwareXDS (VERSION May 1, 2016 BUILT=20160617)
Data scaling softwareXSCALE (VERSION May 1, 2016 BUILT=20160617)
Phasing softwarePHASER (2.7.17)
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]57.78557.7852.820
High resolution limit [Å]2.75012.3002.750
Rmerge0.1750.0441.203
Rmeas0.1930.0491.327
Number of reflections10641139799
<I/σ(I)>9.7425.981.63
Completeness [%]98.690.898.8
Redundancy5.7454.7345.633
CC(1/2)0.9930.9970.610
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2940.1 M Na acetate pH 4.5, 3M NaCl

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon