6XLZ
Structure of NHP D11A.F2 Fab in complex with 16055 V2b peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-19 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9774 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 130.393, 130.393, 170.898 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 94.210 - 2.800 |
R-factor | 0.2183 |
Rwork | 0.216 |
R-free | 0.25480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rfo |
RMSD bond length | 0.010 |
RMSD bond angle | 0.958 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 94.220 | 2.950 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.083 | |
Number of reflections | 21787 | 3087 |
<I/σ(I)> | 11.9 | |
Completeness [%] | 99.8 | 98.9 |
Redundancy | 22.2 | 22.2 |
CC(1/2) | 0.720 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1 M Tris pH 8.0 and 1.32 M K/Na Tartrate at 8.5 mg/ml. Cryo protection: 15% 2R3R Butanediol |