6XLT
The 1.48 Angstrom crystal structure of evolved galactose oxidase variant A3.E7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-22 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.97919 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.282, 89.120, 86.162 |
Unit cell angles | 90.00, 117.82, 90.00 |
Refinement procedure
Resolution | 28.461 - 1.478 |
R-factor | 0.1481 |
Rwork | 0.148 |
R-free | 0.16920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gog |
RMSD bond length | 0.006 |
RMSD bond angle | 1.067 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.510 |
High resolution limit [Å] | 1.478 | 3.650 | 1.480 |
Rmerge | 0.060 | 0.029 | 0.959 |
Rmeas | 0.068 | 0.032 | 1.096 |
Rpim | 0.030 | 0.015 | 0.517 |
Number of reflections | 108128 | 7284 | 7116 |
<I/σ(I)> | 8.3 | ||
Completeness [%] | 99.9 | 99.2 | 99 |
Redundancy | 5 | 4.9 | 4.2 |
CC(1/2) | 0.999 | 0.646 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295 | 10% PEG 6000, 0.1 M CaCl2, 5% glycerol, 10 mM N-Acetylglucosamine and 50 mM acetic acid |