6XJP
Crystal Structure of KPT-185 bound to CRM1 (537-DLTVK-541 to GLCEQ)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2018-06-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 105.947, 105.947, 305.497 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.995 - 2.802 |
R-factor | 0.2172 |
Rwork | 0.215 |
R-free | 0.26040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hb2 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.569 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.850 |
High resolution limit [Å] | 2.800 | 7.590 | 2.800 |
Rmerge | 0.185 | 0.115 | |
Rmeas | 0.185 | 0.120 | |
Rpim | 0.056 | 0.030 | 0.608 |
Total number of observations | 664242 | ||
Number of reflections | 43873 | 2455 | 2143 |
<I/σ(I)> | 5 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 15.1 | 15.2 | 13.8 |
CC(1/2) | 0.987 | 0.656 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 17% (weight/vol) PEG3350, 100 mM Bis-Tris (pH 6.4), 200 mM ammonium nitrate, and 10 mM Spermine HCl |