6XCZ
Porcine pepsin in complex with saquinavir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 66.390, 66.390, 284.572 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.360 - 1.890 |
R-factor | 0.17978 |
Rwork | 0.178 |
R-free | 0.21975 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pep |
RMSD bond length | 0.014 |
RMSD bond angle | 1.663 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.16-3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.500 | 1.930 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.091 | 0.730 |
Rmeas | 0.110 | 0.850 |
Rpim | 0.054 | 0.420 |
Number of reflections | 30114 | 1885 |
<I/σ(I)> | 7.9 | 1.6 |
Completeness [%] | 97.8 | 98 |
Redundancy | 5.5 | 5.9 |
CC(1/2) | 0.995 | 0.649 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 2.9 | 295 | 2 M Ammonium Chloride, 0.1 M acetic acid |