6XCJ
Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2017-12-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.999919 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 138.520, 122.100, 53.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.930 - 2.800 |
R-factor | 0.2296 |
Rwork | 0.227 |
R-free | 0.28400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4lst |
RMSD bond length | 0.008 |
RMSD bond angle | 1.020 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.900 | 2.970 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 23016 | 3659 |
<I/σ(I)> | 13.99 | |
Completeness [%] | 99.8 | |
Redundancy | 5.5 | |
CC(1/2) | 0.998 | 0.644 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 20% PEG 8K, 100mM Tris pH 8, 500mM NaCl |