6XBQ
Streptomyces coelicolor methylmalonyl-CoA epimerase in complex with carboxy-carba(dethia)-CoA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 80 |
Detector technology | IMAGE PLATE |
Collection date | 2018-10-25 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97872 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 68.504, 68.504, 103.315 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.560 - 1.640 |
R-factor | 0.1555 |
Rwork | 0.154 |
R-free | 0.17520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jc5 |
RMSD bond length | 0.016 |
RMSD bond angle | 2.176 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.710 |
High resolution limit [Å] | 1.640 | 1.640 |
Rmerge | 0.147 | 0.886 |
Rmeas | 0.153 | 0.919 |
Rpim | 0.041 | 0.243 |
Number of reflections | 30657 | 2999 |
<I/σ(I)> | 270.4 | 7.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.2 | 14.2 |
CC(1/2) | 1.000 | 0.874 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 100 mM sodium chloride, 100 mM Bis-Tris:HCl pH 7.0, 2 M ammonium sulfate, 5% PEG 400 |