6X8X
Cu-bound structure of an engineered metal-dependent protein trimer, TriCyt1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.977410 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 82.172, 82.172, 48.072 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.840 - 2.505 |
R-factor | 0.2909 |
Rwork | 0.285 |
R-free | 0.34220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bc5 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.061 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.840 | 2.595 |
High resolution limit [Å] | 2.505 | 2.505 |
Rmerge | 0.042 | 0.208 |
Rmeas | 0.043 | 0.213 |
Rpim | 0.010 | 0.047 |
Number of reflections | 12469 | 2010 |
<I/σ(I)> | 53.1 | |
Completeness [%] | 99.5 | 99.9 |
Redundancy | 19.5 | 20 |
CC(1/2) | 1.000 | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 25% PEG2000, 200 mM CaCl2, 100 mM TRIS (pH 8.5) |