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6X7Y

N-acetyl-glucosamine-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]93
Detector technologyPIXEL
Collection date2019-12-07
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9615
Spacegroup nameP 21 21 21
Unit cell lengths45.240, 50.650, 79.420
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.710 - 1.000
R-factor0.1277
Rwork0.127
R-free0.14140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5j6y
RMSD bond length0.016
RMSD bond angle1.682
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.7101.030
High resolution limit [Å]0.9600.960
Rmerge0.0631.035
Number of reflections1069517708
<I/σ(I)>22.14
Completeness [%]95.6
Redundancy11.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH72980.2 M calcium chloride, 0.1 M HEPES (pH 7), 20% (v/v) polyethylene glycol 3350 and ~ 30 % (w/v) N-acetyl-glucosamine

220113

PDB entries from 2024-05-22

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