6X7W
Vaccine-elicited mouse FP-targeting neutralizing antibody vFP49.02 in complex with HIV fusion peptide (residue 512-519)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 69.881, 99.229, 137.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.940 - 1.700 |
R-factor | 0.2161 |
Rwork | 0.214 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cdo |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.106 | 0.059 | 0.977 |
Rmeas | 0.118 | 0.066 | 1.063 |
Rpim | 0.051 | 0.029 | 0.412 |
Total number of observations | 622325 | ||
Number of reflections | 102556 | 5444 | 5178 |
<I/σ(I)> | 5.8 | ||
Completeness [%] | 97.6 | 97.1 | 99.8 |
Redundancy | 6.1 | 5.4 | 6.6 |
CC(1/2) | 0.996 | 0.797 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 0.2 M ammonium sulfate , 0.1 M HEPES, pH 7.5, 20% w/v PEG8000, 10% w/v isopropanol |