6X7U
Crystal Structure of the Human Nudix Hydrolase Nudt16 in complex with FAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-24 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | P 32 |
Unit cell lengths | 64.721, 64.721, 77.751 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.470 - 2.700 |
R-factor | 0.1619 |
Rwork | 0.159 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cou |
RMSD bond length | 0.006 |
RMSD bond angle | 1.498 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.500 | 2.870 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.096 | |
Number of reflections | 9929 | 1602 |
<I/σ(I)> | 11.4 | 1.65 |
Completeness [%] | 99.5 | |
Redundancy | 4.3 | |
CC(1/2) | 0.996 | 0.602 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M ammonium chloride and 20% (w/v) PEG 3350 |