6X7H
Cyanovirin-N Mutation I34Y with Dimannose bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-08 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.999 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.724, 38.011, 55.867 |
Unit cell angles | 90.00, 100.00, 90.00 |
Refinement procedure
Resolution | 15.430 - 1.250 |
R-factor | 0.1413 |
Rwork | 0.140 |
R-free | 0.17340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2rdk |
Data reduction software | XDS (VERSION Jan 26, 2018) |
Data scaling software | Aimless (7.0.62) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.430 | 15.430 | 1.270 |
High resolution limit [Å] | 1.250 | 6.850 | 1.250 |
Rmerge | 0.083 | 0.137 | 0.738 |
Rmeas | 0.098 | 0.191 | 0.885 |
Rpim | 0.053 | 0.133 | 0.482 |
Total number of observations | 185048 | 98 | 8354 |
Number of reflections | 52827 | 85 | 2685 |
<I/σ(I)> | 9.6 | 16.8 | 1.6 |
Completeness [%] | 92.7 | 23 | 95 |
Redundancy | 3.5 | 1.2 | 3.1 |
CC(1/2) | 0.991 | 0.968 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 298 | 2 M ammonium sulfate, 5% isopropanol |