6X6D
Glucocorticoid Receptor DNA binding domain in complex with unmodified precursor for a modern recognition element (pre-GBS)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-16 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 130.426, 39.000, 96.791 |
Unit cell angles | 90.00, 118.71, 90.00 |
Refinement procedure
Resolution | 39.456 - 2.480 |
R-factor | 0.1913 |
Rwork | 0.190 |
R-free | 0.21130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fyl |
RMSD bond length | 0.005 |
RMSD bond angle | 0.662 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.456 | 2.570 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmeas | 0.148 | |
Rpim | 0.079 | |
Number of reflections | 15307 | 1508 |
<I/σ(I)> | 14.05 | |
Completeness [%] | 98.6 | |
Redundancy | 3.1 | |
CC(1/2) | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289.15 | 50 mM Sodium cacodylate pH 6.5, 80 mM Calcium chloride, 1 % glycerol, and 8.5% PEG 400 |