6X06
Nup120 (aa1-757) from S. cerevisiae bound by VHH-SAN11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 61 |
Unit cell lengths | 193.170, 193.170, 78.144 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 83.650 - 4.270 |
R-factor | 0.3364 |
Rwork | 0.334 |
R-free | 0.35930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hxr |
RMSD bond length | 0.002 |
RMSD bond angle | 0.605 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.650 | 4.400 |
High resolution limit [Å] | 4.250 | 4.250 |
Rpim | 0.052 | 0.512 |
Number of reflections | 11664 | 1141 |
<I/σ(I)> | 18.7 | 1.37 |
Completeness [%] | 99.5 | |
Redundancy | 7.3 | 7.2 |
CC(1/2) | 0.938 | 0.524 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 19% PEG 8,000, 0.1M magnesium chloride, 0.1M Tris/HCl pH 8.5 |