Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WZC

Ni-bound structure of an engineered protein trimer, TriCyt3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.2398
Spacegroup nameP 3 2 1
Unit cell lengths82.460, 82.460, 53.118
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.711 - 2.195
R-factor0.1847
Rwork0.181
R-free0.21870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bc5
RMSD bond length0.008
RMSD bond angle0.858
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14-3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.7112.274
High resolution limit [Å]2.1952.195
Rmerge0.7440.578
Rmeas0.7680.619
Rpim0.1870.218
Number of reflections109341068
<I/σ(I)>2.96
Completeness [%]99.6
Redundancy12.7
CC(1/2)0.8870.887
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529825% PEG2000, 0.2 M CaCl2, 0.1 M Bis-Tris (pH 6.5)

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon