Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WZA

Ni-bound structure of an engineered metal-dependent protein trimer, TriCyt1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-08
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.239840
Spacegroup nameP 31 2 1
Unit cell lengths82.115, 82.115, 137.517
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.346 - 2.500
R-factor0.2473
Rwork0.241
R-free0.30590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bc5
RMSD bond length0.009
RMSD bond angle1.058
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.3462.589
High resolution limit [Å]2.5002.500
Rmerge0.1420.688
Rmeas0.1450.706
Rpim0.0330.159
Number of reflections191381865
<I/σ(I)>18.23
Completeness [%]99.7
Redundancy19.2
CC(1/2)0.9990.979
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529822.5% PEG 400, 0.2 M NaCl, 0.1 M HEPES (pH 7.5)

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon