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6WY6

Crystal structure of S. cerevisiae Atg8 in complex with Ede1 (1220-1247)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2017-10-11
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.979
Spacegroup nameP 43
Unit cell lengths49.642, 49.642, 123.446
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.057 - 1.773
R-factor0.1771
Rwork0.176
R-free0.20280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2znp
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER (ccp4)
Refinement softwareREFMAC (ccp4)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.0601.836
High resolution limit [Å]1.7731.773
Rmerge0.0540.409
Rmeas0.0680.586
Rpim0.0320.297
Number of reflections288702848
<I/σ(I)>29.36
Completeness [%]100.099.65
Redundancy8.87.6
CC(1/2)0.9960.862
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8277.151.1 M ammonium sulfate, 0.1 M sodium acetate, pH 4.8, 0.01 M sodium iodide

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