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6WX2

Vaccine-elicited mouse FP-targeting neutralizing antibody vFP16.02 with F60P mutation on light chain in complex with HIV fusion peptide (residue 512-519)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths73.246, 111.697, 123.804
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.650 - 2.390
R-factor0.2027
Rwork0.200
R-free0.25020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6cdo
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18_3861)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.3906.5102.400
Rmerge0.1550.0730.806
Rmeas0.1620.0760.852
Rpim0.0480.0220.269
Number of reflections3991121561947
<I/σ(I)>6.4
Completeness [%]99.698.899.5
Redundancy1111.29.5
CC(1/2)0.9980.913
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2939.9% v/v isopropanol, 0.1 M Tris-HCl, pH 8.5, 9.9% v/v PEG3350

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