6WVI
VKOR-like from Takifugu rubripes
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 153.639, 49.064, 84.326 |
Unit cell angles | 90.00, 112.73, 90.00 |
Refinement procedure
Resolution | 35.430 - 2.400 |
R-factor | 0.1986 |
Rwork | 0.197 |
R-free | 0.23480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b3p |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3855) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.440 |
High resolution limit [Å] | 2.397 | 6.510 | 2.400 |
Rmerge | 0.118 | 0.040 | 1.392 |
Rmeas | 0.136 | 0.046 | 1.616 |
Rpim | 0.067 | 0.023 | 0.804 |
Number of reflections | 22666 | 1178 | 1154 |
<I/σ(I)> | 8.6 | ||
Completeness [%] | 99.0 | 96.6 | 99.5 |
Redundancy | 4 | 3.9 | 3.8 |
CC(1/2) | 0.997 | 0.348 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 7.5 | 295 | 42% PEG 400, 50 mM ammonium formate, 0.1 M HEPES pH 7.5 |