6WUU
Crystal structure of the SARS CoV-2 Papain-like protease in complex with peptide inhibitor VIR250
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-28 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.425, 189.693, 63.118 |
Unit cell angles | 90.00, 98.66, 90.00 |
Refinement procedure
Resolution | 94.850 - 2.790 |
R-factor | 0.1973 |
Rwork | 0.195 |
R-free | 0.22970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6w9c |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 94.850 | 94.850 | 2.930 |
High resolution limit [Å] | 2.790 | 9.250 | 2.790 |
Rmerge | 0.158 | 0.058 | 1.788 |
Rmeas | 0.170 | 0.063 | 1.944 |
Rpim | 0.064 | 0.023 | 0.753 |
Total number of observations | 237255 | 6681 | 28852 |
Number of reflections | 33589 | 953 | 4431 |
<I/σ(I)> | 10.1 | 33.5 | 1.1 |
Completeness [%] | 99.6 | 99.8 | 99.1 |
Redundancy | 7.1 | 7 | 6.5 |
CC(1/2) | 0.996 | 0.996 | 0.437 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | Ammonium Sulfate |