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6WPA

Structure of AvaR1 bound to DNA half-site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2018-04-14
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.978720
Spacegroup nameP 42
Unit cell lengths130.522, 130.522, 180.649
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000 - 3.090
R-factor0.2131
Rwork0.210
R-free0.26460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wp7
RMSD bond length0.007
RMSD bond angle1.360
Data reduction softwareHKL-2000
Data scaling softwareautoPROC
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0003.200
High resolution limit [Å]3.0803.090
Rmerge0.077
Rmeas0.079
Rpim0.0210.338
Number of reflections555445510
<I/σ(I)>25.9
Completeness [%]100.0
Redundancy15.1
CC(1/2)0.9990.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52770.2 M Potassium chloride, 0.01 M Magnesium chloride hexahydrate, 0.05 M Sodium cacodylate trihydrate pH 6.5, 10% w/v Polyethylene glycol 4000 with additive 40 % Formamide

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