6WON
Crystal structure of acetoin dehydrogenase YohF from Salmonella typhimurium
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 298 |
| Detector technology | IMAGE PLATE |
| Collection date | 2018-12-11 |
| Detector | RIGAKU RAXIS IV |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 72.549, 114.171, 219.342 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.490 - 2.130 |
| R-factor | 0.161 |
| Rwork | 0.160 |
| R-free | 0.20660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6ux3 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.795 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.15_3448) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 2.160 |
| High resolution limit [Å] | 2.120 | 2.120 |
| Rmerge | 0.061 | 0.550 |
| Rpim | 0.039 | 0.244 |
| Number of reflections | 103094 | 5055 |
| <I/σ(I)> | 17.35 | 2.05 |
| Completeness [%] | 100.0 | 99.9 |
| Redundancy | 5.8 | |
| CC(1/2) | 0.865 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.2 M lithium sulfate monohydrate, 25% (w/v) PEG3350, 0.1 M bis-Tris pH 6.5, cryoprotectant: paratone |






