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6WON

Crystal structure of acetoin dehydrogenase YohF from Salmonella typhimurium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]298
Detector technologyIMAGE PLATE
Collection date2018-12-11
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths72.549, 114.171, 219.342
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.490 - 2.130
R-factor0.161
Rwork0.160
R-free0.20660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ux3
RMSD bond length0.007
RMSD bond angle0.795
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.15_3448)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.160
High resolution limit [Å]2.1202.120
Rmerge0.0610.550
Rpim0.0390.244
Number of reflections1030945055
<I/σ(I)>17.352.05
Completeness [%]100.099.9
Redundancy5.8
CC(1/2)0.865
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52980.2 M lithium sulfate monohydrate, 25% (w/v) PEG3350, 0.1 M bis-Tris pH 6.5, cryoprotectant: paratone

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