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6WKD

Crystal structure of pentalenene synthase complexed with 12,13-difluorofarnesyl diphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2018-12-14
DetectorADSC QUANTUM 315
Wavelength(s)0.9700
Spacegroup nameP 63
Unit cell lengths182.467, 182.467, 56.212
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.971 - 2.200
R-factor0.2015
Rwork0.201
R-free0.21950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ps1
RMSD bond length0.003
RMSD bond angle0.530
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.320
High resolution limit [Å]2.2002.200
Rmerge0.1101.720
Number of reflections546347917
<I/σ(I)>22.22.2
Completeness [%]99.9100
Redundancy20.421
CC(1/2)1.0000.750
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2960.8-1.2 M sodium tartrate, 100 mM Tris, and 5 mM DTT

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