6WJM
The crystal structure beta-lactamase from Desulfarculus baarsii DSM 2075
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-25 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.722, 73.460, 42.923 |
Unit cell angles | 90.00, 110.30, 90.00 |
Refinement procedure
Resolution | 27.130 - 1.000 |
R-factor | 0.1235 |
Rwork | 0.123 |
R-free | 0.14060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3w4q |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.020 |
High resolution limit [Å] | 1.000 | 2.710 | 1.000 |
Rmerge | 0.061 | 0.044 | 0.258 |
Rmeas | 0.067 | 0.048 | 0.300 |
Rpim | 0.027 | 0.019 | 0.149 |
Total number of observations | 589969 | ||
Number of reflections | 109222 | 6036 | 2977 |
<I/σ(I)> | 13.4 | ||
Completeness [%] | 88.0 | 95.5 | 48.3 |
Redundancy | 5.4 | 6.5 | 3.4 |
CC(1/2) | 0.996 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 0.1M Sodium citrate, 20% 2-propanol, 20% PEG4000 |