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6WGD

Crystal structure of a 6-phospho-beta-glucosidase from Bacillus licheniformis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-04-18
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.98
Spacegroup nameP 31 2 1
Unit cell lengths98.272, 98.272, 285.734
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.425 - 2.200
R-factor0.2117
Rwork0.210
R-free0.24410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ipl
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.17.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.14049.1402.240
High resolution limit [Å]2.20011.4302.200
Rmerge0.1390.0671.540
Rmeas0.1530.0761.696
Rpim0.0650.0330.704
Total number of observations456034329525655
Number of reflections822406974485
<I/σ(I)>7.720.41.5
Completeness [%]99.998.799.8
Redundancy5.54.75.7
CC(1/2)0.9960.9970.860
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729315% PEG4000, 0.1 M ammonium sulphate, and 0.1 M Tris, pH 7.0

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PDB entries from 2024-06-26

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