6WC1
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2020-03-01 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.541 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 88.670, 88.670, 134.020 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 76.800 - 2.400 |
R-factor | 0.2344 |
Rwork | 0.232 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qz8 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.944 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.800 | 2.500 |
High resolution limit [Å] | 2.400 | 2.400 |
Rpim | 0.018 | 0.291 |
Number of reflections | 12038 | 1307 |
<I/σ(I)> | 23.4 | 2.5 |
Completeness [%] | 94.8 | 73.3 |
Redundancy | 16.2 | 12.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | 2-2.4M AmSO4, 0.1M phosphate citrate pH 4 |