6WB6
2.05 A resolution structure of transferrin 1 from Manduca sexta
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.493, 139.062, 146.696 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.050 |
R-factor | 0.212 |
Rwork | 0.209 |
R-free | 0.27190 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | CRANK2 |
Refinement software | PHENIX (dev_3755) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.280 | 47.280 | 2.090 |
High resolution limit [Å] | 2.050 | 10.650 | 2.050 |
Rmerge | 0.162 | 0.081 | 0.827 |
Total number of observations | 544369 | 4151 | 30084 |
Number of reflections | 83612 | 685 | 4581 |
<I/σ(I)> | 7.6 | 15.5 | 2.2 |
Completeness [%] | 100.0 | 98.7 | 100 |
Redundancy | 6.5 | 6.1 | 6.6 |
CC(1/2) | 0.991 | 0.995 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 15% (w/v) PEG 20,000, 0.1 M Hepes |