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6WAJ

Crystal structure of the UBL domain of human NLE1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 61 2 2
Unit cell lengths35.546, 35.546, 205.994
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.330 - 1.900
R-factor0.2491
Rwork0.248
R-free0.25420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dtc
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.17.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.20041.2001.940
High resolution limit [Å]1.9009.1101.900
Rmerge0.0670.0500.880
Rmeas0.0690.0510.903
Rpim0.0160.0130.196
Total number of observations13270112518893
Number of reflections6917105428
<I/σ(I)>21.741.43.2
Completeness [%]100.099.8100
Redundancy19.211.920.8
CC(1/2)0.9990.9990.930
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2912.5 M ammonium sulfate, 0.1 M Tris

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