6W9Q
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 59.011, 59.011, 85.649 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.510 - 2.050 |
R-factor | 0.2334 |
Rwork | 0.233 |
R-free | 0.24590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qz8 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.291 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.500 | 2.100 |
High resolution limit [Å] | 2.050 | 2.050 |
Rpim | 0.600 | |
Number of reflections | 10055 | 1425 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.6 | 8.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 298 | 2.2M AmSO4, 0.1M Citrate-phosphate pH4 |