6W9C
The crystal structure of papain-like protease of SARS CoV-2
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-03-18 |
| Detector | DECTRIS PILATUS3 X 6M |
| Wavelength(s) | 0.9792 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 190.786, 110.280, 64.069 |
| Unit cell angles | 90.00, 96.22, 90.00 |
Refinement procedure
| Resolution | 43.680 - 2.700 |
| R-factor | 0.2372 |
| Rwork | 0.235 |
| R-free | 0.27910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5y3q |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.355 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 43.680 | 43.680 | 2.750 |
| High resolution limit [Å] | 2.700 | 7.320 | 2.700 |
| Rmerge | 0.140 | 0.058 | 0.585 |
| Rmeas | 0.173 | 0.071 | 0.769 |
| Rpim | 0.099 | 0.040 | 0.492 |
| Number of reflections | 20799 | 1163 | 679 |
| <I/σ(I)> | 4.9 | ||
| Completeness [%] | 57.3 | 62.6 | 38.4 |
| Redundancy | 2.5 | 2.9 | 1.9 |
| CC(1/2) | 0.991 | 0.566 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | 0.2 M magnesium acetate, 10% PEG 8000 |






