Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6W9C

The crystal structure of papain-like protease of SARS CoV-2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-18
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.9792
Spacegroup nameC 1 2 1
Unit cell lengths190.786, 110.280, 64.069
Unit cell angles90.00, 96.22, 90.00
Refinement procedure
Resolution43.680 - 2.700
R-factor0.2372
Rwork0.235
R-free0.27910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5y3q
RMSD bond length0.005
RMSD bond angle1.355
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.68043.6802.750
High resolution limit [Å]2.7007.3202.700
Rmerge0.1400.0580.585
Rmeas0.1730.0710.769
Rpim0.0990.0400.492
Number of reflections207991163679
<I/σ(I)>4.9
Completeness [%]57.362.638.4
Redundancy2.52.91.9
CC(1/2)0.9910.566
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52890.2 M magnesium acetate, 10% PEG 8000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon