6W2I
Crystal Structure of Y188G Variant of the Internal UBA Domain of HHR23A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 |
Unit cell lengths | 31.164, 31.164, 40.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.160 - 1.450 |
R-factor | 0.1532 |
Rwork | 0.150 |
R-free | 0.18300 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.068 |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | Aimless (0.7.4) |
Phasing software | HKL2Map (0.4.e-beta) |
Refinement software | PHENIX (1.17.1-3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.160 | 1.968 | 1.502 |
High resolution limit [Å] | 1.450 | 1.900 | 1.450 |
Rmerge | 0.077 | 0.091 | 0.590 |
Rmeas | 0.080 | 0.093 | 0.615 |
Rpim | 0.022 | 0.019 | 0.170 |
Number of reflections | 6875 | 292 | 680 |
<I/σ(I)> | 22.37 | 29.74 | 4.34 |
Completeness [%] | 99.0 | 96.05 | 97.84 |
Redundancy | 13.4 | 24.1 | 12.5 |
CC(1/2) | 1.000 | 0.999 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.0M Ammonium sulfate | |
2 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.0M Ammonium sulfate |