Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6W0P

Putative kojibiose phosphorylase from human microbiome

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-16
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths64.215, 200.451, 293.122
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.440 - 2.230
R-factor0.2034
Rwork0.200
R-free0.24590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1h54
RMSD bond length0.007
RMSD bond angle1.453
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0232)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00049.4402.270
High resolution limit [Å]2.2306.0502.230
Rmerge0.0920.0390.665
Rmeas0.1010.0430.734
Rpim0.0410.0170.304
Number of reflections17117597567804
<I/σ(I)>6.4
Completeness [%]92.79985.8
Redundancy5.96.45.5
CC(1/2)0.9990.548
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62899% PEG 3350, 0.1 M sodium malonate, 0.01 calcium chloride

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon