6VY9
Crystal structure of NotF prenyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 153.591, 208.295, 217.374 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.320 - 3.190 |
R-factor | 0.3074 |
Rwork | 0.307 |
R-free | 0.31580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ld7 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.172 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.320 | 3.300 |
High resolution limit [Å] | 3.190 | 3.190 |
Number of reflections | 115959 | 11141 |
<I/σ(I)> | 9.8 | |
Completeness [%] | 93.6 | |
Redundancy | 7.5 | |
CC(1/2) | 1.000 | 0.440 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.7 | 293 | 3.0 M NaCl, 60 mM urea, 0.1 M MES pH 6.7, 15% ethylene glycol |