6VWF
Structure of ALDH9A1 complexed with NAD+ in space group C222
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2018-09-25 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.00003 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 158.148, 163.466, 84.341 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.130 - 2.640 |
R-factor | 0.2207 |
Rwork | 0.218 |
R-free | 0.27290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a4s |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.130 | 2.770 |
High resolution limit [Å] | 2.640 | 2.640 |
Rmerge | 0.151 | 1.070 |
Rmeas | 0.163 | 1.156 |
Rpim | 0.061 | 0.434 |
Total number of observations | 229337 | 30035 |
Number of reflections | 32497 | 4262 |
<I/σ(I)> | 11.6 | 1.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.1 | 7 |
CC(1/2) | 0.996 | 0.803 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 281 | 0.1 M succinic acid pH 7.0, 15% (w/v) PEG 3350 |