6VT3
Naegleria gruberi RNA ligase K326A mutant apo
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-10-25 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9792 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.700, 65.369, 93.836 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 27.776 - 1.844 |
| R-factor | 0.2131 |
| Rwork | 0.209 |
| R-free | 0.26250 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5cot |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 30.000 | 30.000 | 1.880 |
| High resolution limit [Å] | 1.844 | 5.010 | 1.844 |
| Rmerge | 0.067 | 0.028 | 1.048 |
| Rmeas | 0.075 | 0.032 | 1.156 |
| Rpim | 0.032 | 0.014 | 0.482 |
| Number of reflections | 28480 | 1523 | 1421 |
| <I/σ(I)> | 14.3 | ||
| Completeness [%] | 99.7 | 96.8 | 100 |
| Redundancy | 5.1 | 4.7 | 5.2 |
| CC(1/2) | 0.999 | 0.705 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | The NgrRnlK326A protein sample (21.4 mg/ml) was mixed with equal volume (1 ul) of 0.1 M HEPES pH 6.5, 25% PEG6000. |






