6VQO
T cell receptor-p53-HLA-A2 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 |
Unit cell lengths | 118.130, 118.130, 153.129 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.520 - 3.000 |
R-factor | 0.1642 |
Rwork | 0.162 |
R-free | 0.21080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3utp 3vxt 5d2l |
RMSD bond length | 0.006 |
RMSD bond angle | 1.533 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.800 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.110 | 0.477 |
Number of reflections | 47556 | 3813 |
<I/σ(I)> | 7.4 | |
Completeness [%] | 97.1 | |
Redundancy | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 295 | 12% (w/v) PEG 8000, 0.1 M magnesium acetate |