6VQ5
Crystal Structure of Epiphyas postvittana Pheromone Binding Protein 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 43 |
Unit cell lengths | 53.379, 53.379, 105.949 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.660 - 2.600 |
R-factor | 0.2183 |
Rwork | 0.216 |
R-free | 0.25890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dqe |
RMSD bond length | 0.007 |
RMSD bond angle | 1.377 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | MoRDa |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.670 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.113 | 2.249 |
Rmeas | 0.117 | 2.329 |
Rpim | 0.031 | 0.602 |
Total number of observations | 16455 | |
Number of reflections | 9187 | 1116 |
<I/σ(I)> | 12.4 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.2 | 14.7 |
CC(1/2) | 0.999 | 0.644 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M MES pH 6.5 12 % PEG 20K |