6VOE
HIV-1 wild type protease with GRL-019-17A, a tricyclic cyclohexane fused tetrahydrofuranofuran (CHf-THF) derivative as the P2 ligand and a aminobenzothiazole(Abt)-based P2'-ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 90 |
Detector technology | CCD |
Collection date | 2017-06-28 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.489, 86.241, 45.959 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.300 |
R-factor | 0.1575 |
Rwork | 0.158 |
R-free | 0.20200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nu3 |
RMSD bond length | 0.012 |
RMSD bond angle | 0.031 |
Data reduction software | HKL-2000 (0.714.n) |
Data scaling software | HKL-2000 (0.714.n) |
Phasing software | PHASER (4.064 Datablock id: mmcif_pdbx.dic) |
Refinement software | SHELX (2014-7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.350 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.056 | 0.495 |
Rmeas | 0.061 | 0.046 |
Rpim | 0.024 | 0.018 |
Number of reflections | 54691 | 6110 |
<I/σ(I)> | 28.1 | 3.2 |
Completeness [%] | 94.4 | 66.4 |
Redundancy | 6.1 | 3.8 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 298 | 1.25 M NaCl, 0.1 M Acetate, pH 4.8 |