6VNY
Crystal structure of TYK2 kinase with compound 10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-04-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.344, 73.106, 101.994 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.830 - 2.300 |
R-factor | 0.1764 |
Rwork | 0.174 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lxp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.110 |
Data scaling software | SCALA (3.3.16) |
Refinement software | BUSTER (2.11.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 101.994 | 101.994 | 2.420 |
High resolution limit [Å] | 2.298 | 7.270 | 2.300 |
Rmerge | 0.028 | 0.320 | |
Rmeas | 0.089 | 0.032 | 0.411 |
Rpim | 0.036 | 0.014 | 0.204 |
Total number of observations | 74689 | 2406 | 7042 |
Number of reflections | 12711 | 468 | 1825 |
<I/σ(I)> | 17 | 41.4 | 4 |
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 5.9 | 5.1 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 298 | 0.1 M bis-tris pH 5.5, 0.25 M NaCl, 10 mM TCEP, 27-33% PEG-3350 |