6VMF
Crystal structure of the Y766F mutant of GoxA soaked with glycine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 107.857, 92.985, 187.048 |
Unit cell angles | 90.00, 95.06, 90.00 |
Refinement procedure
Resolution | 48.421 - 2.240 |
R-factor | 0.2024 |
Rwork | 0.202 |
R-free | 0.25020 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6byw |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.421 | 2.280 |
High resolution limit [Å] | 2.240 | 2.240 |
Rmerge | 0.121 | 0.641 |
Rmeas | 0.143 | 0.750 |
Rpim | 0.074 | 0.384 |
Number of reflections | 173760 | 8718 |
<I/σ(I)> | 5.9 | 1.9 |
Completeness [%] | 98.0 | 99.7 |
Redundancy | 3.7 | 3.7 |
CC(1/2) | 0.992 | 0.685 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 7.5 | 293 | Protein at 10 mg/mL was combined in a 1:1 ratio with precipitant solution composed of 23% PEG 3350, 0.1 M HEPES pH 7.5, 0.1 M ammonium sulfate. |