Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VMC

T4H2 T cell receptor bound to HLA-A2 presenting gp100T2L peptide (ILDQVPFSV)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03320
Spacegroup nameP 64
Unit cell lengths129.532, 129.532, 115.656
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution25.740 - 2.850
R-factor0.2002
Rwork0.197
R-free0.23850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tvh
RMSD bond length0.002
RMSD bond angle0.446
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8502.850
Rmerge0.1971.182
Rmeas0.2021.224
Rpim0.0450.316
Number of reflections257821266
<I/σ(I)>263
Completeness [%]100.0100
Redundancy19.814.9
CC(1/2)0.9980.611
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529618% v/v PEG10000, 16% v/v glycerol, 250 mM Tris pH 8.5, 60 mM sodium chloride

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon