6VM7
SILv44 T cell receptor bound to HLA-A2 presenting gp100 peptide (ITDQVPFSV)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.118, 94.403, 143.849 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.460 - 2.410 |
R-factor | 0.2015 |
Rwork | 0.199 |
R-free | 0.24120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tvh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.494 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.450 |
High resolution limit [Å] | 2.410 | 2.410 |
Rmerge | 0.126 | 0.566 |
Rmeas | 0.138 | 0.629 |
Rpim | 0.055 | 0.267 |
Number of reflections | 35998 | 1725 |
<I/σ(I)> | 13.1 | 2 |
Completeness [%] | 98.8 | 97 |
Redundancy | 6 | 5.1 |
CC(1/2) | 0.990 | 0.779 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | 16% v/v PEG3350, 280 mM ammonium citrate dibasic |