6VLS
Structure of C-terminal fragment of Vip3A toxin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-12-15 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 136.088, 127.884, 149.178 |
| Unit cell angles | 90.00, 91.38, 90.00 |
Refinement procedure
| Resolution | 28.930 - 3.200 |
| R-factor | 0.2 |
| Rwork | 0.198 |
| R-free | 0.23890 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3mbp |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.572 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 28.930 | 3.309 |
| High resolution limit [Å] | 3.195 | 3.195 |
| Number of reflections | 82438 | 8077 |
| <I/σ(I)> | 6.11 | |
| Completeness [%] | 97.3 | |
| Redundancy | 2.3 | |
| CC(1/2) | 0.993 | 0.541 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 291 | 0.1 M sodium acetate pH 4.2, 0.5 M potassium formate, 0.1 M ammonium sulfate and 11% PEG4000 |
