6VLE
Crystal structure of human alpha 1,6-fucosyltransferase, FUT8 in its Apo-form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9536 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 95.019, 62.204, 109.905 |
Unit cell angles | 90.00, 90.88, 90.00 |
Refinement procedure
Resolution | 47.251 - 2.280 |
R-factor | 0.2035 |
Rwork | 0.202 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2de0 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.500 | 2.340 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.135 | 1.711 |
Rmeas | 0.151 | 1.907 |
Rpim | 0.067 | 0.833 |
Total number of observations | 293792 | 23265 |
Number of reflections | 58867 | 4549 |
<I/σ(I)> | 8.2 | 1 |
Completeness [%] | 99.8 | 100 |
Redundancy | 5 | 5.1 |
CC(1/2) | 0.997 | 0.630 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 12% PEG 20000, 0.1 M HEPES, pH 7.5 |