6VKO
Crystal Structure of human PARP-1 CAT domain bound to inhibitor UKTT15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-21 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1158 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 139.701, 129.751, 102.720 |
Unit cell angles | 90.00, 111.36, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.800 |
R-factor | 0.2857 |
Rwork | 0.284 |
R-free | 0.31220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ds3 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.471 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 95.664 | 47.832 | 2.950 |
High resolution limit [Å] | 2.800 | 8.850 | 2.800 |
Rmerge | 0.065 | 0.709 | |
Rmeas | 0.170 | 0.071 | 0.799 |
Rpim | 0.076 | 0.029 | 0.359 |
Total number of observations | 184578 | 6523 | 26101 |
Number of reflections | 39944 | 1298 | 5800 |
<I/σ(I)> | 5.3 | 9 | 1.8 |
Completeness [%] | 95.4 | 94.5 | 95.5 |
Redundancy | 4.6 | 5 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 2M Ammonium Sulfate, Bis-Tris pH6.5 |